BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D06LP1|AL427476
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig316 1693 0.0
>3x_Contig316
Length = 2080
Score = 1693 bits (850), Expect = 0.0
Identities = 860/868 (99%)
Strand = Plus / Minus
Query: 1 aasagtatgtctgtgataaaagggtacactttaaatacttcgagaaagcagttaaactag 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 aagagtatgtctgtgataaaagggtacactttaaatacttcgagaaagcagttaaactag 1203
Query: 61 aatctaattggggcatcatttgcaactacgtaaatgamagattagtttacctaatagaaa 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1202 aatctaattggggcatcatttgcaactacgtaaatgaaagattagtttacctaatagaaa 1143
Query: 121 gtcactcagaagccatggaaggaagattttaactctgaaaggaaagacaaaaataattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gtcactcagaagccatggaaggaagattttaactctgaaaggaaagacaaaaataattac 1083
Query: 181 aaagtcataaattgacgatgggccgaagcgttcccagcatcaaacatattacaactgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 aaagtcataaattgacgatgggccgaagcgttcccagcatcaaacatattacaactgcat 1023
Query: 241 gttctttttcatgttctttctaattttctttcctgattgttctttaattgaagtttagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gttctttttcatgttctttctaattttctttcctgattgttctttaattgaagtttagaa 963
Query: 301 tactgttttaacaactgatcttatcgttcattttaattctaatacagactttaccgcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 tactgttttaacaactgatcttatcgttcattttaattctaatacagactttaccgcata 903
Query: 361 tcatactataatatttatnanadcaatcattaattcaacaacatctaatctgcccgcmaa 420
|||||||||||||||||| | | |||||||||||||||||||||||||||||||||| ||
Sbjct: 902 tcatactataatatttataaaaacaatcattaattcaacaacatctaatctgcccgcaaa 843
Query: 421 ttaaaatcttacgcgttatgtttccagtaaattttccgttttaaatataaatatgcatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ttaaaatcttacgcgttatgtttccagtaaattttccgttttaaatataaatatgcatat 783
Query: 481 attcaggatagcgggtggtatctagtattatttatacactatttatgctttaatgcgtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 attcaggatagcgggtggtatctagtattatttatacactatttatgctttaatgcgtcc 723
Query: 541 ggcaaacccataggtattccatcctttcccctgtttctttagttctctcttatttatcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggcaaacccataggtattccatcctttcccctgtttctttagttctctcttatttatcga 663
Query: 601 tgatacggctgttggtcaagaatgaaatagtgaaatttcttgctatttaagarattggtt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 662 tgatacggctgttggtcaagaatgaaatagtgaaatttcttgctatttaagaaattggtt 603
Query: 661 cttgtcacatacaaccttaaaatgatgaaacaatatgaacaagacacgttagattttgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cttgtcacatacaaccttaaaatgatgaaacaatatgaacaagacacgttagattttgga 543
Query: 721 cacaccgtctgtctacactttcatagattatcagatcccaggcgttgttgaaacgagatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cacaccgtctgtctacactttcatagattatcagatcccaggcgttgttgaaacgagatg 483
Query: 781 ttgagtaagagaagtttgaggctggtaagtctcaccggtatggtgattttmgttcttttc 840
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 482 ttgagtaagagaagtttgaggctggtaagtctcaccggtatggtgattttcgttcttttc 423
Query: 841 ttcatcaggcacaatgcagagtccgtga 868
||||||||||||||||||||||||||||
Sbjct: 422 ttcatcaggcacaatgcagagtccgtga 395
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7141
Number of Sequences: 1807
Number of extensions: 7141
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)